added error propagation notes

1 files changed, 118 insertions, 0 deletions

diff --git a/notes/Makefile b/notes/Makefile
new file mode 100644
index 0000000..5625df5
--- /dev/null
+++ b/notes/Makefile
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+# -*- make -*-
+# FILE: "/home/evmik/jobs/wm/2013_fall_Experimental_Atomic_Physics_251/manual/Makefile"
+# LAST MODIFICATION: "Tue, 27 Aug 2013 10:36:02 -0400 (evmik)"
+# (C) 2001 by Eugeniy Mikhailov, <evmik@tamu.edu>
+# $Id: Makefile,v 1.3 2003/04/23 20:40:19 evmik Exp $
+
+MANUSCRIPT_DIR = $(shell basename `pwd`)
+SUBDIR=`find ./ -maxdepth 1 -type d |sed 1d| sed /CVS/d`
+
+LATEX_OPTIONS="-interaction=nonstopmode -src-specials"
+
+DATE := $(shell date +%Y%m%d)
+
+ROOT_OF_MAIN_TEX_FILE= EIT_filter
+MAIN_TEX_FILE=$(ROOT_OF_MAIN_TEX_FILE).tex
+
+source_files  = $(wildcard *.tex)
+source_basename = $(source_files:%.tex=%)
+
+tex_targets  = $(wildcard *.tex)
+pdf_targets  = $(tex_targets:%.tex=%.pdf)	
+ps_targets  = $(tex_targets:%.tex=%.ps)	
+dvi_targets  = $(tex_targets:%.tex=%.dvi)	
+
+default: pdf
+
+INCLUDED_TEX_FILES=$(wildcard chapters/*.tex)
+GENERATED_AUX_FILES=$(INCLUDED_TEX_FILES:%.tex=%.aux)
+
+
+$(INCLUDED_TEX_FILES):
+	 
+
+dvi: $(dvi_targets)
+
+$(dvi_targets):  %.dvi : %.tex
+	rubber $<
+
+
+ps:	$(ps_targets)
+
+$(ps_targets).ps: %.ps : %.dvi
+	dvips -o $@ $<
+
+
+dvipdf: $(pdf_targets)
+
+#home of  dvipdfm utilit is at
+#http://gaspra.kettering.edu/dvipdfm/
+# if one want to use hyperred in pdf and dvipdfm converter
+# then \usepackage[dvipdfm]{hyperref} should be use
+# but then no links in dvi would be present
+# so we use \usepackage{hyperref} but make pdf with dvipdf 
+# which do it through dvi -> ps -> pdf conversion
+#$(pdf_targets): %.pdf : %.dvi 
+	#dvipdfmx $<
+	# dvipdf $<
+
+pdf: $(pdf_targets)
+
+$(pdf_targets): %.pdf : %.tex $(INCLUDED_TEX_FILES)
+	rubber -d $<
+
+
+
+zip:
+	zip -r arch.$(ROOT_OF_MAIN_TEX_FILE).`date +%F`.zip  $(ROOT_OF_MAIN_TEX_FILE).tex Makefile bibliography.bib figures ol.bst osajnl.bst osajnl2.rtx osajnl2.sty `tex2figlist.sh $(ROOT_OF_MAIN_TEX_FILE).tex`
+
+clean_results:
+	rm -f $(pdf_targets)
+	
+clean: clean_tex clean_bib clean_backups
+	rm -f $(ROOT_OF_MAIN_TEX_FILE).tar.gz
+
+real_clean: clean_all
+
+clean_backups:
+	rm -f *~
+
+clean_tex:
+	rm -f $(tex_targets:%.tex=%.dvi)
+	rm -f $(tex_targets:%.tex=%.log)
+	rm -f $(tex_targets:%.tex=%.aux)
+	rm -f $(tex_targets:%.tex=%.nav)
+	rm -f $(tex_targets:%.tex=%.out)
+	rm -f $(tex_targets:%.tex=%.snm)
+	rm -f $(tex_targets:%.tex=%.toc)
+	rm -f $(tex_targets:%.tex=%.vrb)
+	rm -f $(tex_targets:%.tex=%.blg)
+	rm -f $(GENERATED_AUX_FILES)
+	rm -f missfont.log
+	rm -f *Notes.bib
+
+clean_bib:
+	rm -f $(tex_targets:%.tex=%.bbl)
+
+clean_for_arxive: clean_results clean_backups clean_tex
+
+clean_all: clean clean_results clean_backups
+
+arxive_submission: $(ROOT_OF_MAIN_TEX_FILE).for_arxive.$(DATE).tar.gz
+
+$(ROOT_OF_MAIN_TEX_FILE).for_arxive.$(DATE).tar.gz: clean_for_arxive
+	cd ..; tar c --dereference --exclude=.git --exclude=*gz \
+		$(MANUSCRIPT_DIR)/$(tex_targets) \
+		$(MANUSCRIPT_DIR)/$(ROOT_OF_MAIN_TEX_FILE).bbl \
+		$(MANUSCRIPT_DIR)/ready_plots/* \
+		| gzip > $@
+	mv ../$@ .
+
+
+arch:
+	cd ..; tar c --dereference --exclude=.git --exclude=*gz $(MANUSCRIPT_DIR) |gzip > $(ROOT_OF_MAIN_TEX_FILE).$(DATE).tar.gz
+	mv ../$(ROOT_OF_MAIN_TEX_FILE).$(DATE).tar.gz .
+
+
+upload_draft_to_web:
+