updated references from Irina

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diff --git a/bibliography.bib b/bibliography.bib
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--- a/bibliography.bib
+++ b/bibliography.bib
@@ -6722,3 +6722,394 @@ Irina Novikova and Eugeniy E. Mikhailov and Jonathan P. Dowling},
 	year = {2017}
 }
 
+
+@article{xiaoPRL06,
+  title = {Diffusion-Induced Ramsey Narrowing},
+  author = {Xiao, Yanhong and Novikova, Irina and Phillips, David F. and Walsworth, Ronald L.},
+  journal = {Phys. Rev. Lett.},
+  volume = {96},
+  issue = {4},
+  pages = {043601},
+  numpages = {4},
+  year = {2006},
+  month = {Feb},
+  publisher = {American Physical Society},
+  doi = {10.1103/PhysRevLett.96.043601},
+  url = {http://link.aps.org/doi/10.1103/PhysRevLett.96.043601}
+}
+
+@article{XiaOE08, 
+author = {Yanhong Xiao and Irina Novikova and David F. Phillips and Ronald L. Walsworth}, 
+journal = {Opt. Express}, 
+keywords = {Coherent optical effects; Line shapes and shifts; Coherence; Coherent optical effects; Linewidth},
+number = {18}, 
+pages = {14128--14141}, 
+publisher = {OSA},
+title = {Repeated interaction model for diffusion-induced Ramsey narrowing}, 
+volume = {16}, 
+month = {Sep},
+year = {2008},
+url = {http://www.opticsexpress.org/abstract.cfm?URI=oe-16-18-14128},
+doi = {10.1364/OE.16.014128},
+abstract = {In a recent paper \[Y. Xiao et al., Phys. Rev. Lett. 96, 043601(2006)\] we characterized diffusion-induced Ramsey narrowing as a generalphenomenon, in which diffusion of coherence in-and-out of an interactionregion such as a laser beam induces spectral narrowing of the associatedresonance lineshape. Here we provide a detailed presentation of the repeatedinteraction model of diffusion-induced Ramsey narrowing, with particularfocus on its application to Electromagnetically Induced Transparency(EIT) of atomic vapor in a buffer gas cell. We compare this model both toexperimental data and numerical calculations.},
+}
+
+@article{XiaoMPL09,
+author = {Yanhong Xiao},
+title = {Spectral Line Narrowing in Electromagnetically Induced Transparency},
+journal = {Modern Physics Letters B},
+volume = {23},
+number = {05},
+pages = {661-680},
+year = {2009},
+doi = {10.1142/S0217984909019028},
+
+URL = {http://www.worldscientific.com/doi/abs/10.1142/S0217984909019028},
+eprint = {http://www.worldscientific.com/doi/pdf/10.1142/S0217984909019028}
+}
+
+@article{novikovaJMO05,
+author = { I.   Novikova  and  Y.   Xiao  and  D. F.   Phillips  and  R. L.   Walsworth },
+title = {EIT and diffusion of atomic coherence},
+journal = {Journal of Modern Optics},
+volume = {52},
+number = {16},
+pages = {2381-2390},
+year = {2005},
+doi = {10.1080/09500340500275637},
+URL = { http://dx.doi.org/10.1080/09500340500275637},
+eprint = {http://dx.doi.org/10.1080/09500340500275637}
+}
+
+@article{ZanonPRL05,
+  title = {High Contrast Ramsey Fringes with Coherent-Population-Trapping Pulses in a Double Lambda Atomic System},
+  author = {Zanon, T. and Guerandel, S. and de Clercq, E. and Holleville, D. and Dimarcq, N. and Clairon, A.},
+  journal = {Phys. Rev. Lett.},
+  volume = {94},
+  issue = {19},
+  pages = {193002},
+  numpages = {4},
+  year = {2005},
+  month = {May},
+  publisher = {American Physical Society},
+  doi = {10.1103/PhysRevLett.94.193002},
+  url = {http://link.aps.org/doi/10.1103/PhysRevLett.94.193002}
+}
+
+@article{kitchingPRA15,
+  title = {Light shifts in a pulsed cold-atom coherent-population-trapping clock},
+  author = {Blanshan, E. and Rochester, S. M. and Donley, E. A. and Kitching, J.},
+  journal = {Phys. Rev. A},
+  volume = {91},
+  issue = {4},
+  pages = {041401},
+  numpages = {6},
+  year = {2015},
+  month = {Apr},
+  publisher = {American Physical Society},
+  doi = {10.1103/PhysRevA.91.041401},
+  url = {http://link.aps.org/doi/10.1103/PhysRevA.91.041401}
+}
+
+@article{PatiJOSAB15, 
+author = {G. S. Pati and Z. Warren and N. Yu and M. S. Shahriar}, 
+journal = {J. Opt. Soc. Am. B}, 
+keywords = {Line shapes and shifts; Coherent optical effects; Spectroscopy, high-resolution},
+number = {3}, 
+pages = {388--394}, 
+publisher = {OSA},
+title = {Computational studies of light shift in a Raman\&\#x2013;Ramsey interference-based atomic clock}, 
+volume = {32}, 
+month = {Mar},
+year = {2015},
+url = {http://josab.osa.org/abstract.cfm?URI=josab-32-3-388},
+doi = {10.1364/JOSAB.32.000388},
+}
+
+@article{MitsunagaPRA13,
+  title = {Line-shape comparison of electromagnetically induced transparency and Raman Ramsey fringes in sodium vapor},
+  author = {Yoshida, Ichiro and Hayashi, Nobuhito and Fujita, Kazuki and Taniguchi, Shuya and Hoshina, Yoshitaka and Mitsunaga, Masaharu},
+  journal = {Phys. Rev. A},
+  volume = {87},
+  issue = {2},
+  pages = {023836},
+  numpages = {6},
+  year = {2013},
+  month = {Feb},
+  publisher = {American Physical Society},
+  doi = {10.1103/PhysRevA.87.023836},
+  url = {http://link.aps.org/doi/10.1103/PhysRevA.87.023836}
+}
+
+@ARTICLE{ClaironIEEE09,
+author={Castagna, N. and Boudot, R. and Guerandel, S. and Clercq, E. and Dimarcq, N. and Clairon, C.},
+journal={Ultrasonics, Ferroelectrics, and Frequency Control, IEEE Transactions on},
+title={Investigations on continuous and pulsed interrogation for a CPT atomic clock},
+year={2009},
+volume={56},
+number={2},
+pages={246-253},
+doi={10.1109/TUFFC.2009.1033},
+ISSN={0885-3010},
+month={February},}
+
+@ARTICLE{zanonIEEE05,
+author={Zanon, T. and Tremine, S. and Guerandel, S. and de Clercq, E. and Holleville, D. and Dimarcq, N. and Clairon, A.},
+journal={Instrumentation and Measurement, IEEE Transactions on},
+title={Observation of Raman-Ramsey fringes with optical CPT pulses},
+year={2005},
+volume={54},
+number={2},
+pages={776-779},
+doi={10.1109/TIM.2004.843400},
+ISSN={0018-9456},
+month={April},}
+
+@article{yashchukRSI00,
+     author = "Yashchuk, Valeriy V. and Budker, Dmitry and Davis, John R.",
+   title = "Laser frequency stabilization using linear magneto-optics",
+   journal = "Review of Scientific Instruments",
+   year = "2000",
+   volume = "71",
+   number = "2", 
+   pages = "341-346",
+   url = "http://scitation.aip.org/content/aip/journal/rsi/71/2/10.1063/1.1150205",
+   doi = "http://dx.doi.org/10.1063/1.1150205" 
+}
+
+@article{PhysRevLett.48.867,
+  title = {Observation of Ramsey Fringes Using a Stimulated, Resonance Raman Transition in a Sodium Atomic Beam},
+  author = {Thomas, J. E. and Hemmer, P. R. and Ezekiel, S. and Leiby, C. C. and Picard, R. H. and Willis, C. R.},
+  journal = {Phys. Rev. Lett.},
+  volume = {48},
+  issue = {13},
+  pages = {867--870},
+  numpages = {0},
+  year = {1982},
+  month = {Mar},
+  publisher = {American Physical Society},
+  doi = {10.1103/PhysRevLett.48.867},
+  url = {http://link.aps.org/doi/10.1103/PhysRevLett.48.867}
+}
+
+@article{zanonPRA2011,
+  title = {Ultrahigh-resolution spectroscopy with atomic or molecular dark resonances: Exact steady-state line shapes and asymptotic profiles in the adiabatic pulsed regime},
+  author = {Zanon-Willette, Thomas and de Clercq, Emeric and Arimondo, Ennio},
+  journal = {Phys. Rev. A},
+  volume = {84},
+  issue = {6},
+  pages = {062502},
+  numpages = {17},
+  year = {2011},
+  month = {Dec},
+  publisher = {American Physical Society},
+  doi = {10.1103/PhysRevA.84.062502},
+  url = {http://link.aps.org/doi/10.1103/PhysRevA.84.062502}
+}
+
+@article{Liu:13, 
+author = {X. Liu and J-M. M\'{e}rolla and S. Gu\'{e}randel and E. de Clercq and R. Boudot}, 
+journal = {Opt. Express}, 
+keywords = {Atomic and molecular physics; Coherent optical effects},
+number = {10}, 
+pages = {12451--12459}, 
+publisher = {OSA},
+title = {Ramsey spectroscopy of high-contrast CPT resonances with push-pull optical pumping in Cs vapor}, 
+volume = {21}, 
+month = {May},
+year = {2013},
+url = {http://www.opticsexpress.org/abstract.cfm?URI=oe-21-10-12451},
+doi = {10.1364/OE.21.012451},
+abstract = {We report on the detection of high-contrast and narrow Coherent Population Trapping (CPT) Ramsey fringes in a Cs vapor cell using a simple-architecture laser system. The latter allows the combination of push-pull optical pumping (PPOP) and a temporal Ramsey-like pulsed interrogation. An originality of the optics package is the use of a single Mach-Zehnder electro-optic modulator (MZ EOM) both for optical sidebands generation and light switch for pulsed interaction. Typical Ramsey fringes with a linewidth of 166 Hz and a contrast of 33 \% are detected in a cm-scale buffer-gas filled Cs vapor cell. This technique could be interesting for the development of high-performance and low power consumption compact vapor cell clocks based on CPT.},
+}
+
+@article{knappeCM07, 
+author = {S. A. Knappe}, 
+journal = {Compr. Microsys.}, 
+pages = {571 -- 612}, 
+publisher = {OSA},
+title = {Emerging Topics: MEMS Atomic Clocks}, 
+volume = {3}, 
+year = {2007},
+abstract = {The combination of MEMS fabrication with atomic clocks has enabled a new generation of small, cheap, low-power devices. Since the proposal of chip-scale atomic clocks (CSACs) in 2002, the fields of MEMS-based atomic sensors and coherent population trapping (CPT) spectroscopy have progressed rapidly. This review gives an overview over microfabrication techniques used for CSACs, the fabrication and integration of the critical components. Furthermore, the performance of MEMS clocks is evaluated in terms of frequency stability and sensitivity to external parameters, size, and power consumption. Possibilities for reaching the final goal of a MEMS clock with a fractional frequency instability below 10-11 at 1 hour of integration in a package of volume of 1 cm3, consuming 30 mW of power, are discussed. Finally, a broad field of advances spectroscopic techniques is reviewed and their advantages and drawbacks for the improvement of chip-scale atomic clocks.},
+}
+
+
+@article{balabasPRL10,
+  title = {Polarized Alkali-Metal Vapor with Minute-Long Transverse Spin-Relaxation Time},
+  author = {Balabas, M. V. and Karaulanov, T. and Ledbetter, M. P. and Budker, D.},
+  journal = {Phys. Rev. Lett.},
+  volume = {105},
+  issue = {7},
+  pages = {070801},
+  numpages = {4},
+  year = {2010},
+  month = {Aug},
+  publisher = {American Physical Society},
+  doi = {10.1103/PhysRevLett.105.070801},
+  url = {http://link.aps.org/doi/10.1103/PhysRevLett.105.070801}
+}
+
+@article{budkerPRA05,
+  title = {Microwave transitions and nonlinear magneto-optical rotation in anti-relaxation-coated cells},
+  author = {Budker, D. and Hollberg, L. and Kimball, D. F. and Kitching, J. and Pustelny, S. and Yashchuk, V. V.},
+  journal = {Phys. Rev. A},
+  volume = {71},
+  issue = {1},
+  pages = {012903},
+  numpages = {9},
+  year = {2005},
+  month = {Jan},
+  publisher = {American Physical Society},
+  doi = {10.1103/PhysRevA.71.012903},
+  url = {http://link.aps.org/doi/10.1103/PhysRevA.71.012903}
+}
+
+
+@article{BoudotAPL2015,
+   author = "Hafiz, Moustafa Abdel and Maurice, Vincent and Chutani, Ravinder and Passilly, Nicolas and Gorecki, Christophe and Guérandel, Stéphane and de Clercq, Emeric and Boudot, Rodolphe",
+   title = "Characterization of Cs vapor cell coated with octadecyltrichlorosilane using coherent population trapping spectroscopy",
+   journal = "Journal of Applied Physics",
+   year = "2015",
+   volume = "117",
+   number = "18", 
+   eid = 184901,
+   pages = "",
+   url = "http://scitation.aip.org/content/aip/journal/jap/117/18/10.1063/1.4919841",
+   doi = "http://dx.doi.org/10.1063/1.4919841" 
+}
+
+@article{romalisJAP09,
+   author = "Seltzer, S. J. and Romalis, M. V.",
+   title = "High-temperature alkali vapor cells with antirelaxation surface coatings",
+   journal = "Journal of Applied Physics",
+   year = "2009",
+   volume = "106",
+   number = "11", 
+   eid = 114905,
+   pages = "",
+   url = "http://scitation.aip.org/content/aip/journal/jap/106/11/10.1063/1.3236649",
+   doi = "http://dx.doi.org/10.1063/1.3236649" 
+}
+
+@incollection{Shah201021,
+title = "Chapter 2 - Advances in Coherent Population Trapping for Atomic Clocks ",
+editor = "E. Arimondo, P.R. Berman and C.C. Lin",
+booktitle = "Advances in Atomic, Molecular, and Optical Physics",
+publisher = "Academic Press",
+year = "2010",
+volume = "59",
+pages = "21 - 74",
+series = "Advances In Atomic, Molecular, and Optical Physics ",
+issn = "1049-250X",
+doi = "http://dx.doi.org/10.1016/S1049-250X(10)59002-5",
+url = "http://www.sciencedirect.com/science/article/pii/S1049250X10590025",
+author = "Vishal Shah and John Kitching",
+abstract = "Abstract We review advances in the field of coherent population trapping (CPT) over the last decade with respect to the application of this physical phenomenon to atomic frequency references. We provide an overview of both the basic phenomenon of \{CPT\} and how it has traditionally been used in atomic clocks. We then describe a number of advances made with the goal of improving the resonance contrast, decreasing its line width, and reducing light shifts that affect the long-term stability. We conclude with a discussion of how these new approaches can impact future generations of laboratory and commercial instruments. "
+}
+
+
+@article{knappeOE05, 
+author = {S. Knappe and P.D.D. Schwindt and V. Shah and L. Hollberg and J. Kitching and L. Liew and J. Moreland}, 
+journal = {Opt. Express}, 
+keywords = {Spectroscopy, high-resolution; Micro-optics},
+number = {4}, 
+pages = {1249--1253}, 
+publisher = {OSA},
+title = {A chip-scale atomic clock based on 87Rb with improved frequency stability}, 
+volume = {13}, 
+month = {Feb},
+year = {2005},
+url = {http://www.opticsexpress.org/abstract.cfm?URI=oe-13-4-1249},
+doi = {10.1364/OPEX.13.001249},
+abstract = {We demonstrate a microfabricated atomic clock physics package based on coherent population trapping (CPT) on the D1 line of 87Rb atoms. The package occupies a volume of 12 mm3 and requires 195 mW of power to operate at an ambient temperature of 200 {\textdegree}C. Compared to a previous microfabricated clock exciting the D2 transition in Cs \[1\], this 87Rb clock shows significantly improved short- and long-term stability. The instability at short times is 4{\texttimes}10-11/$\tau$1/2 and the improvement over the Cs device is due mainly to an increase in resonance amplitude. At longer times ($\tau$\>50 s), the improvement results from the reduction of a slow drift to -5{\texttimes}10-9/day. The drift is most likely caused by a chemical reaction of nitrogen and barium inside the cell. When probing the atoms on the D1 line, spin-exchange collisions between Rb atoms and optical pumping appear to have increased importance compared to the D2 line.},
+}
+
+@Article{yanoIEEE2014,
+  author =       "Yano, Yuichiro and Goka, Shigeyoshi ",
+  title =        "High-contrast Coherent Population Trapping based on Crossed Polarizers Method",
+  journal =      " 	IEEE Trans. Ultrasonics, Ferroelectrics, and Frequency Control",
+  year =         "2014",
+  volume =       "61",
+  pages =        "1953 - 1960"
+}
+
+@article{KitchingJOSA01,
+author = {J. Kitching and H. G. Robinson and L. Hollberg and S. Knappe and R. Wynands},
+journal = {J. Opt. Soc. Am. B},
+keywords = {Coherent optical effects; Line shapes and shifts; Metrological instrumentation; Coherent optical effects; Spectroscopy, high-resolution; Spectroscopy, nonlinear},
+number = {11},
+pages = {1676--1683},
+publisher = {OSA},
+title = {Optical-pumping noise in laser-pumped, all-optical microwave frequency references},
+volume = {18},
+month = {Nov},
+year = {2001},
+url = {http://josab.osa.org/abstract.cfm?URI=josab-18-11-1676},
+doi = {10.1364/JOSAB.18.001676},
+abstract = {We demonstrate that optical pumping plays a significant role in determining the noise in certain types of laser-pumped vapor-cell microwave frequency standards by changing the way in which the laser's FM noise is converted to AM noise by the optical-absorption profile. When this FM--AM conversion is the dominant noise source, the noise spectrum of the transmitted intensity can be dramatically altered by the optical-pumping process. FM noise at Fourier frequencies larger than the optical-pumping time is converted to AM noise differently from noise at lower Fourier frequencies. This effect can modify the optimum design of vapor-cell frequency references and adds an additional FM--AM-related noise source that cannot be eliminated with laser tuning.},
+}
+
+@article{SunOE16,
+author = {X. L. Sun and J. W. Zhang and P.F. Cheng and C. Xu and L. Zhao and L. J. Wang},
+journal = {Opt. Express},
+keywords = {Metrology; Spectroscopy, high-resolution},
+number = {5},
+pages = {4532--4541},
+publisher = {OSA},
+title = {Investigation of Ramsey spectroscopy in a lin-par-lin Ramsey coherent population trapping clock with dispersion detection},
+volume = {24},
+month = {Mar},
+year = {2016},
+url = {http://www.opticsexpress.org/abstract.cfm?URI=oe-24-5-4532},
+doi = {10.1364/OE.24.004532},
+abstract = {We demonstrate that the lin-par-lin Ramsey coherent population trapping 87Rb clock using a dispersion detection technique has a promising performance. We theoretically and experimentally investigate the signal-to-noise ratio of the Ramsey spectrum signal by varying the relative angle of the polarizer and analyzer as well as the magnetic field. Based on the experimental results, the optimized relative angle and magnetic field are determined. This kind of atomic clock is attractive for the development of compact, high performance vapor clock based on CPT.},
+}
+
+@Article{TaichenachevJETP2005,
+author="Taichenachev, A. V.
+and Yudin, V. I.
+and Velichansky, V. L.
+and Zibrov, S. A.",
+title="On the unique possibility of significantly increasing the contrast of dark resonances on the D1 line of 87Rb",
+journal="Journal of Experimental and Theoretical Physics Letters",
+year="2005",
+volume="82",
+number="7",
+pages="398--403",
+abstract="We propose and study, theoretically and experimentally, a new scheme of excitation of a coherent population trapping resonance for the D1 line of alkali atoms with nuclear spin I = 3/2 by bichromatic linearly polarized light (lin{\textbardbl}lin field) under the conditions of spectral resolution of the excited state. The unique properties of this scheme result in a high contrast of dark resonance for the D1 line of 87Rb.",
+issn="1090-6487",
+doi="10.1134/1.2142864",
+url="http://dx.doi.org/10.1134/1.2142864"
+}
+
+@article{ZibrovPhysRevA.81.013833.2010,
+  title = {Coherent-population-trapping resonances with linearly polarized light for all-optical miniature atomic clocks},
+  author = {Zibrov, Sergei A. and Novikova, Irina and Phillips, David F. and Walsworth, Ronald L. and Zibrov, Alexander S. and Velichansky, Vladimir L. and Taichenachev, Alexey V. and Yudin, Valery I.},
+  journal = {Phys. Rev. A},
+  volume = {81},
+  issue = {1},
+  pages = {013833},
+  numpages = {7},
+  year = {2010},
+  month = {Jan},
+  publisher = {American Physical Society},
+  doi = {10.1103/PhysRevA.81.013833},
+  url = {https://link.aps.org/doi/10.1103/PhysRevA.81.013833}
+}
+
+@article{BreschiPhysRevA.79.0638372009,
+  title = {Quantitative study of the destructive quantum-interference effect on coherent population trapping},
+  author = {Breschi, E. and Kazakov, G. and Lammegger, R. and Mileti, G. and Matisov, B. and Windholz, L.},
+  journal = {Phys. Rev. A},
+  volume = {79},
+  issue = {6},
+  pages = {063837},
+  numpages = {10},
+  year = {2009},
+  month = {Jun},
+  publisher = {American Physical Society},
+  doi = {10.1103/PhysRevA.79.063837},
+  url = {https://link.aps.org/doi/10.1103/PhysRevA.79.063837}
+}
+