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-rw-r--r--gui_win.m152
1 files changed, 85 insertions, 67 deletions
diff --git a/gui_win.m b/gui_win.m
index f9300d7..25f3224 100644
--- a/gui_win.m
+++ b/gui_win.m
@@ -44,11 +44,6 @@ end
% End initialization code - DO NOT EDIT
-
-
-
-
-
% --- Executes just before gui_win is made visible.
function gui_win_OpeningFcn(hObject, eventdata, handles, varargin)
% This function has no output args, see OutputFcn.
@@ -121,20 +116,74 @@ global background_m;
% If we need to substract the background, we do it
% background_m is a global variable
if get(handles.button2substract,'Value') > 0
- m = image_display - background_m;
+% m = image_display - background_m;
else
- m = image_display;
+% m = image_display;
end;
-% Read the tolerance value from the GUI
-tol = str2num(get(handles.readtolerance,'String'));
+[Ny, Nx] = size(image_display);
% Display what we have before doing fit
axes(handles.image2display);
-imagesc(m);
-set(handles.image2display,'PlotBoxAspectRatio',[4 3 1],'DataAspectRatio',[1 1 1]);
+imagesc(image_display);
+% we need specific aspect ratio for images for them not to be stretched
+set(handles.image2display,'PlotBoxAspectRatio',[Nx Ny 1],'DataAspectRatio',[1 1 1]);
drawnow;
+% display cross lines if needed
+if get(handles.showcross,'Value')
+ display_cross_marks_and_cross_sections(handles)
+end
+
+
+
+
+
+function display_cross_marks_and_cross_sections(handles)
+global cross_coordinates;
+global image_display;
+[Ny, Nx] = size(image_display);
+if any( isnan(cross_coordinates) )
+ % cross coordinates are undefined no need to draw cross
+else
+ x0=cross_coordinates(1);
+ y0=cross_coordinates(2);
+ hline_x=[1,Nx];
+ hline_y=[y0,y0];
+ vline_x=[x0,x0];
+ vline_y=[1,Ny];
+ cross_color = 'white';
+ cross_line_width =2;
+ % show cross marks
+ axes(handles.image2display);
+ hold on;
+ plot(hline_x, hline_y, 'LineWidth', cross_line_width, 'Color', cross_color);
+ plot(vline_x, vline_y, 'LineWidth', cross_line_width, 'Color', cross_color);
+end
+
+% define actual image cross sections
+if any( isnan(cross_coordinates) )
+ % we just assign bunch of zeros for dummy cross sections
+ vsection = image_display(:,1)*NaN;
+ hsection = image_display(1,:)*NaN;
+else
+ x0=cross_coordinates(1);
+ y0=cross_coordinates(2);
+ % define displayed image cross section
+ vsection = image_display(:,x0);
+ hsection = image_display(y0,:);
+end
+% draw above cross sections
+% vertical
+axes(handles.ysectiondisplay);
+hold off;
+h = plot(vsection);
+set(h,'Color','red','LineWidth',2);
+% horizontal
+axes(handles.xsectiondisplay);
+hold off;
+h = plot(hsection);
+set(h,'Color','red','LineWidth',2);
function grab_image_and_update_display(handles)
@@ -165,7 +214,6 @@ global image_cleaned;
global image_fitted;
image_cleaned = 0;
image_fitted = 0;
-set(handles.showcross,'Value',0);
set(handles.chooseoriginal,'Value',1);
isworking =1;
% Paint the button and change text
@@ -221,7 +269,6 @@ image_cleaned = 0;
image_fitted = 0;
isworking =1;
set(handles.chooseoriginal,'Value',1);
-set(handles.showcross,'Value',0);
if image_display > 0
image_display = image_original;
display_stuff(handles);
@@ -230,7 +277,6 @@ end;
% This calls a file-open dialog and runs the beam profiler on the choosen
% file
if get(handles.button2loadimage,'Value')
- set(handles.showcross,'Value',0);
set(handles.button2start,'Value',1);
set(handles.button2start,'BackgroundColor','Red');
set(handles.button2start,'String','STOP');
@@ -283,11 +329,6 @@ if (isworking == 1)
else
isworking = 1;
set(handles.button2clean,'String','Working');
- if get(handles.showcross,'Value')
- set(handles.showcross,'Value',0);
- image_display=image_display+image_negative;
- end;
-
%read the attenuation from the GUI
filter = str2num(get(handles.readstrength,'String'));
radius = str2num(get(handles.readrange,'String'));
@@ -716,7 +757,6 @@ global image_display;
global image_original;
global image_cleaned;
global image_fitted;
-set(handles.showcross,'Value',0);
if get(handles.chooseoriginal,'Value')
image_display=image_original;
display_stuff(handles);
@@ -746,64 +786,42 @@ else
end;
-%To show the cross on the screen
+function x=check_bound(x,xleft,xright)
+% check if number out of bound and then assign it to the mid of the region
+if xleft > xright
+ % sanity check for bounds
+ tmp=xright;
+ xright=xleft;
+ xleft=tmp;
+end
+if x<xleft || x>xright
+ x=(xleft+xright)/2;
+end
+
+%To show the cross on the screen we need to get its coordinates
% --- Executes on button press in showcross.
function showcross_Callback(hObject, eventdata, handles)
% hObject handle to showcross (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
+global cross_coordinates;
global image_display;
-global image_cross;
-global image_negative;
-global background_m;
-if get(handles.button2substract,'Value') > 0
- image_display = image_display - background_m;
-end;
-[sizey sizex] = size(image_display);
-image_cross=image_display;
-
+[Ny, Nx] = size(image_display);
if get(handles.showcross,'Value')
- if image_display == 0
- set(handles.showcross,'Value',0)
- else
- [x0,y0]=ginput(1);
- x0=round(x0);
- y0=round(y0);
- max2 = max(image_display(:));
-
- % Here we draw crossections
- hold off;
- axes(handles.ysectiondisplay);
- h = plot(image_display(:,x0));
- hold on;
- set(h,'Color','red','LineWidth',2);
-
-
- hold off;
- axes(handles.xsectiondisplay);
- h = plot(image_display(y0,:));
- set(h,'Color','red','LineWidth',2);
-
-
-
- %draw cross on the image
- for y=1:sizey
- image_cross(y,x0) = max(max2,image_display(y,x0));
- end;
- for x=1:sizex
- image_cross(y0,x) = max(max2,image_display(y0,x));
- end;
-
- image_negative = image_display-image_cross;
- image_display = image_cross;
- display_stuff(handles);
- end;
+ [x0,y0]=ginput(1);
+ x0=check_bound(x0, 1, Nx);
+ y0=check_bound(y0, 1, Ny);
+ x0=round(x0);
+ y0=round(y0);
+ cross_coordinates = [x0,y0];
else
- image_display=image_display+image_negative;
- display_stuff(handles);
+ cross_coordinates = [NaN,NaN];
end;
+display_stuff(handles);
+
+