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* moved ground level decay time to parametersEugeniy Mikhailov2012-12-111-4/+3
* Merge branch 'circ_polarizations'Eugeniy Mikhailov2012-11-3020-106/+2115
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| * added post processing script and sample case parametersEugeniy Mikhailov2012-11-302-0/+92
| * added target to copy mathematica filesEugeniy Mikhailov2012-11-291-0/+6
| * added needed run_tests.py to the test dirEugeniy Mikhailov2012-11-281-0/+350
| * added auxiliary makefilesEugeniy Mikhailov2012-11-283-0/+127
| * completed move of mathematica generated files to includesEugeniy Mikhailov2012-11-283-11/+13
| * typo in makefileEugeniy Mikhailov2012-11-282-8/+20
| * mathematica generated files are used as includes nowEugeniy Mikhailov2012-11-285-173/+178
| * Makefile test properly works with included to xmds filesEugeniy Mikhailov2012-11-281-3/+17
| * now we use proper xml includes in xmds file for generated codeEugeniy Mikhailov2012-11-284-94/+107
| * use headers files for testEugeniy Mikhailov2012-11-281-0/+67
| * renamed content of the file to reflect file nameEugeniy Mikhailov2012-11-282-4/+4
| * some mathematica generated files are now inserted via c++ #includeEugeniy Mikhailov2012-11-283-155/+163
| * change Maxwell probability related vectors to static oneEugeniy Mikhailov2012-11-271-8/+8
| * changed argument and variables name to a shorter versionEugeniy Mikhailov2012-11-271-21/+17
| * git ci tests are addedEugeniy Mikhailov2012-11-272-0/+676
| * Added proper output xsil file nameEugeniy Mikhailov2012-11-271-1/+1
| * xmds: compilation problem fix Sqrt --> sqrt as generated by mathematicaEugeniy Mikhailov2012-11-161-81/+81
| * xmds: insert proper equations from mathematica where rt --> rt2Eugeniy Mikhailov2012-11-161-2/+2
| * Added arguments to give magnetic field projection in Larmor frequency unitsEugeniy Mikhailov2012-11-161-4/+4
| * added proper rho elements into the density matrix elementEugeniy Mikhailov2012-11-151-1/+1
| * fields definitions are placedEugeniy Mikhailov2012-11-151-0/+641
* | move Maxwell distribution from computed vector to just a vectorEugeniy Mikhailov2012-11-271-8/+8
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* added code from newly regenerated mathematica->xmds filesEugeniy Mikhailov2012-09-281-113/+93
* updated test cases since we use new etas separated for each transitionEugeniy Mikhailov2012-09-262-242/+56
* use of mathematica generated etas normalized to the atomic densityEugeniy Mikhailov2012-09-261-18/+8
* removed code related to unused density_matrix_averaged vectorEugeniy Mikhailov2012-09-261-112/+0
* Replace Ec with conj(E) for E1,E2,E3,E4Eugeniy Mikhailov2012-09-261-41/+32
* fix typos in commentsEugeniy Mikhailov2012-09-251-2/+2
* Modified tests callEugeniy Mikhailov2012-09-252-612/+5
* added test case to the main xmds fileEugeniy Mikhailov2012-09-251-0/+6
* updated test suite file according to new Mathematica definitionsEugeniy Mikhailov2012-09-251-102/+47
* heavy use of Hermitian properties in dRho/dt calculationsEugeniy Mikhailov2012-09-251-86/+50
* added test files for simulationsEugeniy Mikhailov2012-09-255-0/+1719
* Fixed dE/dz equations according to the latest Mathematica fileEugeniy Mikhailov2012-09-241-6/+6
* added imaginary one to propagation equation into the polarizationEugeniy Mikhailov2012-09-201-4/+4
* reflect new xmds file name in MakefilesEugeniy Mikhailov2012-09-202-25/+19
* changed printed figures command to match new octaveEugeniy Mikhailov2012-09-201-0/+99
* added some notes aboit optimization performanceEugeniy Mikhailov2012-09-061-0/+17
* First draft of realistic Rb which compiles and runsEugeniy Mikhailov2012-08-211-112/+243
* changed some substitution to better match our XMDSEugeniy Mikhailov2012-08-215-0/+699
* v lattice size 10 -> 100Eugeniy Mikhailov2012-06-131-3/+1
* updated comment about choice of the time latticeEugeniy Mikhailov2012-06-131-2/+4
* time lattice updated to 10000 pointsEugeniy Mikhailov2012-06-131-1/+3
* added working string to SI integration methodEugeniy Mikhailov2012-06-131-0/+1
* changed time lattice to preserve convergence at large detuningEugeniy Mikhailov2012-06-131-1/+11
* added halt no finite feature to stop execution on bad calculationsEugeniy Mikhailov2012-06-131-0/+1
* added diagnostic and fft thread parametersEugeniy Mikhailov2012-06-131-1/+3
* added type="imaginary" to the operator to speed up, but no noticeable changeEugeniy Mikhailov2012-06-131-1/+1
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