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authorEugeniy E. Mikhailov <evgmik@gmail.com>2024-07-13 18:00:20 -0400
committerEugeniy E. Mikhailov <evgmik@gmail.com>2024-07-13 18:00:20 -0400
commitf5c9611d2d277a7e456c8f952d7f6a78ca891f4a (patch)
tree4443d1641451e807b93cc324d6fffb7e9f46ab06 /tests/test_file_utils.py
parente566ab7fcdf9eebfba6bdcce5c7beb738ad906ea (diff)
downloadqolab-f5c9611d2d277a7e456c8f952d7f6a78ca891f4a.tar.gz
qolab-f5c9611d2d277a7e456c8f952d7f6a78ca891f4a.zip
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Diffstat (limited to 'tests/test_file_utils.py')
-rw-r--r--tests/test_file_utils.py95
1 files changed, 75 insertions, 20 deletions
diff --git a/tests/test_file_utils.py b/tests/test_file_utils.py
index f35999d..65ea0c4 100644
--- a/tests/test_file_utils.py
+++ b/tests/test_file_utils.py
@@ -3,31 +3,86 @@ import os
from qolab.file_utils import infer_compression, save_table_with_header
+
def test_infer_compression():
- assert infer_compression('data.dat') is None
- assert infer_compression('data.unknown_ext') is None
- assert infer_compression('data.dat.gz') == 'gzip'
- assert infer_compression('data.dat.bz') == 'bzip'
- assert infer_compression('data.dat.bz2') == 'bzip'
+ assert infer_compression("data.dat") is None
+ assert infer_compression("data.unknown_ext") is None
+ assert infer_compression("data.dat.gz") == "gzip"
+ assert infer_compression("data.dat.bz") == "bzip"
+ assert infer_compression("data.dat.bz2") == "bzip"
+
def test_save_table_with_header_match_filename_to_compression():
import tempfile
- data = [ [1, 3], [2, 5] ]
- headerstr=['header 1', 'header 2']
- with tempfile.TemporaryDirectory(prefix='qolab_test') as d:
- fname = os.path.join(d, 't.dat')
- assert save_table_with_header(fname, data, header=headerstr, compressionmethod=None, match_filename_to_compression=True) == (fname)
- assert save_table_with_header(fname, data, header=headerstr, compressionmethod='gzip', match_filename_to_compression=True) == (fname+'.gz')
- assert save_table_with_header(fname, data, header=headerstr, compressionmethod='bzip', match_filename_to_compression=True) == (fname+'.bz')
+
+ data = [[1, 3], [2, 5]]
+ headerstr = ["header 1", "header 2"]
+ with tempfile.TemporaryDirectory(prefix="qolab_test") as d:
+ fname = os.path.join(d, "t.dat")
+ assert save_table_with_header(
+ fname,
+ data,
+ header=headerstr,
+ compressionmethod=None,
+ match_filename_to_compression=True,
+ ) == (fname)
+ assert save_table_with_header(
+ fname,
+ data,
+ header=headerstr,
+ compressionmethod="gzip",
+ match_filename_to_compression=True,
+ ) == (fname + ".gz")
+ assert save_table_with_header(
+ fname,
+ data,
+ header=headerstr,
+ compressionmethod="bzip",
+ match_filename_to_compression=True,
+ ) == (fname + ".bz")
# now cases when requested extension does not match the compression
- assert save_table_with_header(fname+'.gz', data, header=headerstr, compressionmethod=None, match_filename_to_compression=True) == (fname+'.gz.dat')
- assert save_table_with_header(fname+'.bz', data, header=headerstr, compressionmethod='gzip', match_filename_to_compression=True) == (fname+'.bz.gz')
- assert save_table_with_header(fname+'.gz', data, header=headerstr, compressionmethod='bzip', match_filename_to_compression=True) == (fname+'.gz.bz')
+ assert save_table_with_header(
+ fname + ".gz",
+ data,
+ header=headerstr,
+ compressionmethod=None,
+ match_filename_to_compression=True,
+ ) == (fname + ".gz.dat")
+ assert save_table_with_header(
+ fname + ".bz",
+ data,
+ header=headerstr,
+ compressionmethod="gzip",
+ match_filename_to_compression=True,
+ ) == (fname + ".bz.gz")
+ assert save_table_with_header(
+ fname + ".gz",
+ data,
+ header=headerstr,
+ compressionmethod="bzip",
+ match_filename_to_compression=True,
+ ) == (fname + ".gz.bz")
# do as I told cases, extension does not match compression
- assert save_table_with_header(fname+'.gz', data, header=headerstr, compressionmethod=None, match_filename_to_compression=False) == (fname+'.gz')
- assert save_table_with_header(fname, data, header=headerstr, compressionmethod='gzip', match_filename_to_compression=False) == (fname)
- assert save_table_with_header(fname, data, header=headerstr, compressionmethod='bzip', match_filename_to_compression=False) == (fname)
-
-
+ assert save_table_with_header(
+ fname + ".gz",
+ data,
+ header=headerstr,
+ compressionmethod=None,
+ match_filename_to_compression=False,
+ ) == (fname + ".gz")
+ assert save_table_with_header(
+ fname,
+ data,
+ header=headerstr,
+ compressionmethod="gzip",
+ match_filename_to_compression=False,
+ ) == (fname)
+ assert save_table_with_header(
+ fname,
+ data,
+ header=headerstr,
+ compressionmethod="bzip",
+ match_filename_to_compression=False,
+ ) == (fname)