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* Merge branch 'circ_polarizations'Eugeniy Mikhailov2012-11-301-103/+18
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| * completed move of mathematica generated files to includesEugeniy Mikhailov2012-11-281-11/+5
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| * now we use proper xml includes in xmds file for generated codeEugeniy Mikhailov2012-11-281-94/+15
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* | move Maxwell distribution from computed vector to just a vectorEugeniy Mikhailov2012-11-271-8/+8
|/ | | | | | | | | | | | | Thanks to suggestion of Graham Dennis, this skip unnecessary calculations of the Maxwell probability distributions at every step since. Thus avoids recalculation. Below the original comment: Your computed_vector's "Maxwell_distribution_probabilities" and "Maxwell_distribution_probabilities_norm" are constant.  If you just change them to be <vector> elements changing the <evaluation> tags to <initialisation> tags, this will ensure that they are not evaluated every time they are needed.
* added code from newly regenerated mathematica->xmds filesEugeniy Mikhailov2012-09-281-113/+93
| | | | | * the main change is presense of the header and footer lines which allows to easily remove add this code at the right amount
* use of mathematica generated etas normalized to the atomic densityEugeniy Mikhailov2012-09-261-18/+8
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* removed code related to unused density_matrix_averaged vectorEugeniy Mikhailov2012-09-261-112/+0
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* Replace Ec with conj(E) for E1,E2,E3,E4Eugeniy Mikhailov2012-09-261-41/+32
| | | | * this reduces the amount of hand introduced code
* fix typos in commentsEugeniy Mikhailov2012-09-251-2/+2
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* added test case to the main xmds fileEugeniy Mikhailov2012-09-251-0/+6
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* heavy use of Hermitian properties in dRho/dt calculationsEugeniy Mikhailov2012-09-251-86/+50
| | | | * also read constants from mathematica generated files
* Fixed dE/dz equations according to the latest Mathematica fileEugeniy Mikhailov2012-09-241-6/+6
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* added imaginary one to propagation equation into the polarizationEugeniy Mikhailov2012-09-201-4/+4
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* First draft of realistic Rb which compiles and runsEugeniy Mikhailov2012-08-211-112/+243
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* changed some substitution to better match our XMDSEugeniy Mikhailov2012-08-211-0/+511