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* better estimate of the pulse amplitude for fitEugeniy Mikhailov2012-12-191-1/+1
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* Added contour plots of dispersion slope to RbXMDSSetup1.nb.Simon Rochester2012-12-161-21/+255
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* added mathematica clean up targetEugeniy Mikhailov2012-12-111-0/+10
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* added new functions to extract delay timesEugeniy Mikhailov2012-12-112-0/+41
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* new set of parameter files demonstrating slow and fast light switchEugeniy Mikhailov2012-12-114-1/+35
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* added new test case using --gt argumentEugeniy Mikhailov2012-12-112-76/+89
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* moved ground level decay time to parametersEugeniy Mikhailov2012-12-111-4/+3
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* Merge branch 'circ_polarizations'Eugeniy Mikhailov2012-11-3021-135/+2184
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| * added post processing script and sample case parametersEugeniy Mikhailov2012-11-302-0/+92
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| * added target to copy mathematica filesEugeniy Mikhailov2012-11-291-0/+6
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| * generated files renamed and contain xml sugar nowEugeniy Mikhailov2012-11-291-24/+41
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| * added needed run_tests.py to the test dirEugeniy Mikhailov2012-11-281-0/+350
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| * added auxiliary makefilesEugeniy Mikhailov2012-11-283-0/+127
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| * completed move of mathematica generated files to includesEugeniy Mikhailov2012-11-283-11/+13
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| * typo in makefileEugeniy Mikhailov2012-11-282-8/+20
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| * mathematica generated files are used as includes nowEugeniy Mikhailov2012-11-285-173/+178
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| * Makefile test properly works with included to xmds filesEugeniy Mikhailov2012-11-281-3/+17
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| * now we use proper xml includes in xmds file for generated codeEugeniy Mikhailov2012-11-284-94/+107
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| * use headers files for testEugeniy Mikhailov2012-11-281-0/+67
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| * renamed content of the file to reflect file nameEugeniy Mikhailov2012-11-282-4/+4
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| * rename some of generated file from .txt to .hEugeniy Mikhailov2012-11-281-13/+21
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| * some mathematica generated files are now inserted via c++ #includeEugeniy Mikhailov2012-11-283-155/+163
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| * change Maxwell probability related vectors to static oneEugeniy Mikhailov2012-11-271-8/+8
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| * changed argument and variables name to a shorter versionEugeniy Mikhailov2012-11-271-21/+17
| | | | | | | | | | thanks to my bugreport and patch xmds can now handle multiple similar sounding arguments
| * git ci tests are addedEugeniy Mikhailov2012-11-272-0/+676
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| * Added proper output xsil file nameEugeniy Mikhailov2012-11-271-1/+1
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| * xmds: compilation problem fix Sqrt --> sqrt as generated by mathematicaEugeniy Mikhailov2012-11-161-81/+81
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| * mathematica: Sqrt -> sqrt for C code generatorEugeniy Mikhailov2012-11-161-1/+4
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| * xmds: insert proper equations from mathematica where rt --> rt2Eugeniy Mikhailov2012-11-161-2/+2
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| * Mathematica: typo fix rt ---> rt2Eugeniy Mikhailov2012-11-161-1/+2
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| * Added arguments to give magnetic field projection in Larmor frequency unitsEugeniy Mikhailov2012-11-161-4/+4
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| * added proper rho elements into the density matrix elementEugeniy Mikhailov2012-11-151-1/+1
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| * fixed typo in propagation equation generator: removed unwanted _a subindexEugeniy Mikhailov2012-11-151-8/+19
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| * fields definitions are placedEugeniy Mikhailov2012-11-151-0/+641
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* | move Maxwell distribution from computed vector to just a vectorEugeniy Mikhailov2012-11-271-8/+8
|/ | | | | | | | | | | | | Thanks to suggestion of Graham Dennis, this skip unnecessary calculations of the Maxwell probability distributions at every step since. Thus avoids recalculation. Below the original comment: Your computed_vector's "Maxwell_distribution_probabilities" and "Maxwell_distribution_probabilities_norm" are constant.  If you just change them to be <vector> elements changing the <evaluation> tags to <initialisation> tags, this will ensure that they are not evaluated every time they are needed.
* Allow arbitrary B-field direction.Simon Rochester2012-10-211-340/+183
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* New version, RbXMDSSetup1.nb, with arbitrary sigma_+/- components for all ↵Simon Rochester2012-10-171-0/+2972
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* added code from newly regenerated mathematica->xmds filesEugeniy Mikhailov2012-09-281-113/+93
| | | | | * the main change is presense of the header and footer lines which allows to easily remove add this code at the right amount
* changed comment line in the generated xmds code to conform to xmds/xml syntaxEugeniy Mikhailov2012-09-281-6/+20
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* Added list of DM variables to output, and comments at the beginning and end ↵Simon Rochester2012-09-271-77/+160
| | | | of each text file.
* updated test cases since we use new etas separated for each transitionEugeniy Mikhailov2012-09-262-242/+56
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* use of mathematica generated etas normalized to the atomic densityEugeniy Mikhailov2012-09-261-18/+8
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* removed code related to unused density_matrix_averaged vectorEugeniy Mikhailov2012-09-261-112/+0
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* Replace Ec with conj(E) for E1,E2,E3,E4Eugeniy Mikhailov2012-09-261-41/+32
| | | | * this reduces the amount of hand introduced code
* dRho/dt uses conj(E) instead of EcEugeniy Mikhailov2012-09-261-5/+13
| | | | | | * this simplifies the logic in xmds, since otherwise I have to manually add Ec=conj(E) for appropriate fields. * This might be a bit slower in computation but should be fine
* Added definitions of etas, and modified propagation equation creation so ↵Simon Rochester2012-09-251-40/+53
| | | | that it will work regardless of the order of the states.
* fix typos in commentsEugeniy Mikhailov2012-09-251-2/+2
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* Changes in XMDS code generation.Simon Rochester2012-09-251-38/+16
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* added constants definition for C code with "const double"Eugeniy Mikhailov2012-09-251-5/+13
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* removed 'complex' in the C code for rho initializationEugeniy Mikhailov2012-09-251-2322/+2327
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