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* added post processing script and sample case parametersEugeniy Mikhailov2012-11-302-0/+92
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* added target to copy mathematica filesEugeniy Mikhailov2012-11-291-0/+6
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* generated files renamed and contain xml sugar nowEugeniy Mikhailov2012-11-291-24/+41
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* added needed run_tests.py to the test dirEugeniy Mikhailov2012-11-281-0/+350
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* added auxiliary makefilesEugeniy Mikhailov2012-11-283-0/+127
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* completed move of mathematica generated files to includesEugeniy Mikhailov2012-11-283-11/+13
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* typo in makefileEugeniy Mikhailov2012-11-282-8/+20
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* mathematica generated files are used as includes nowEugeniy Mikhailov2012-11-285-173/+178
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* Makefile test properly works with included to xmds filesEugeniy Mikhailov2012-11-281-3/+17
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* now we use proper xml includes in xmds file for generated codeEugeniy Mikhailov2012-11-284-94/+107
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* use headers files for testEugeniy Mikhailov2012-11-281-0/+67
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* renamed content of the file to reflect file nameEugeniy Mikhailov2012-11-282-4/+4
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* rename some of generated file from .txt to .hEugeniy Mikhailov2012-11-281-13/+21
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* some mathematica generated files are now inserted via c++ #includeEugeniy Mikhailov2012-11-283-155/+163
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* change Maxwell probability related vectors to static oneEugeniy Mikhailov2012-11-271-8/+8
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* changed argument and variables name to a shorter versionEugeniy Mikhailov2012-11-271-21/+17
| | | | | thanks to my bugreport and patch xmds can now handle multiple similar sounding arguments
* git ci tests are addedEugeniy Mikhailov2012-11-272-0/+676
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* Added proper output xsil file nameEugeniy Mikhailov2012-11-271-1/+1
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* xmds: compilation problem fix Sqrt --> sqrt as generated by mathematicaEugeniy Mikhailov2012-11-161-81/+81
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* mathematica: Sqrt -> sqrt for C code generatorEugeniy Mikhailov2012-11-161-1/+4
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* xmds: insert proper equations from mathematica where rt --> rt2Eugeniy Mikhailov2012-11-161-2/+2
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* Mathematica: typo fix rt ---> rt2Eugeniy Mikhailov2012-11-161-1/+2
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* Added arguments to give magnetic field projection in Larmor frequency unitsEugeniy Mikhailov2012-11-161-4/+4
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* added proper rho elements into the density matrix elementEugeniy Mikhailov2012-11-151-1/+1
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* fixed typo in propagation equation generator: removed unwanted _a subindexEugeniy Mikhailov2012-11-151-8/+19
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* fields definitions are placedEugeniy Mikhailov2012-11-151-0/+641
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* Allow arbitrary B-field direction.Simon Rochester2012-10-211-340/+183
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* New version, RbXMDSSetup1.nb, with arbitrary sigma_+/- components for all ↵Simon Rochester2012-10-171-0/+2972
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* added code from newly regenerated mathematica->xmds filesEugeniy Mikhailov2012-09-281-113/+93
| | | | | * the main change is presense of the header and footer lines which allows to easily remove add this code at the right amount
* changed comment line in the generated xmds code to conform to xmds/xml syntaxEugeniy Mikhailov2012-09-281-6/+20
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* Added list of DM variables to output, and comments at the beginning and end ↵Simon Rochester2012-09-271-77/+160
| | | | of each text file.
* updated test cases since we use new etas separated for each transitionEugeniy Mikhailov2012-09-262-242/+56
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* use of mathematica generated etas normalized to the atomic densityEugeniy Mikhailov2012-09-261-18/+8
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* removed code related to unused density_matrix_averaged vectorEugeniy Mikhailov2012-09-261-112/+0
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* Replace Ec with conj(E) for E1,E2,E3,E4Eugeniy Mikhailov2012-09-261-41/+32
| | | | * this reduces the amount of hand introduced code
* dRho/dt uses conj(E) instead of EcEugeniy Mikhailov2012-09-261-5/+13
| | | | | | * this simplifies the logic in xmds, since otherwise I have to manually add Ec=conj(E) for appropriate fields. * This might be a bit slower in computation but should be fine
* Added definitions of etas, and modified propagation equation creation so ↵Simon Rochester2012-09-251-40/+53
| | | | that it will work regardless of the order of the states.
* fix typos in commentsEugeniy Mikhailov2012-09-251-2/+2
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* Changes in XMDS code generation.Simon Rochester2012-09-251-38/+16
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* added constants definition for C code with "const double"Eugeniy Mikhailov2012-09-251-5/+13
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* removed 'complex' in the C code for rho initializationEugeniy Mikhailov2012-09-251-2322/+2327
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* Modified tests callEugeniy Mikhailov2012-09-252-612/+5
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* added test case to the main xmds fileEugeniy Mikhailov2012-09-251-0/+6
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* updated test suite file according to new Mathematica definitionsEugeniy Mikhailov2012-09-251-102/+47
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* heavy use of Hermitian properties in dRho/dt calculationsEugeniy Mikhailov2012-09-251-86/+50
| | | | * also read constants from mathematica generated files
* added test files for simulationsEugeniy Mikhailov2012-09-255-0/+1719
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* Merge branch 'master' of qo.physics.wm.edu:NresonancesEugeniy Mikhailov2012-09-251-268/+224
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| * Remove conjugate DM variables from generated equations.Simon Rochester2012-09-251-268/+224
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* | Fixed dE/dz equations according to the latest Mathematica fileEugeniy Mikhailov2012-09-241-6/+6
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* Another bug fix in propagation generation code in RbXMDSSetup.nb.Simon Rochester2012-09-241-120/+258
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