1 files changed, 92 insertions, 0 deletions
diff --git a/xmds2/Genas_system/pp_rho.m b/xmds2/Genas_system/pp_rho.m
new file mode 100644
index 0000000..515f746
--- /dev/null
+++ b/xmds2/Genas_system/pp_rho.m
@@ -0,0 +1,92 @@
+Genas_system
+
+%% all density matrix elements in one plot
+% diagonal populations, 
+% upper triangle real part of coherences, 
+% lower diagonal imaginary part of coherences
+figure(3)
+subplot(4,4,1); imagesc (z_2, t_2, r11_out_2);  caxis([0,1]); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('rho_{11}')
+title('rho_{11}')
+subplot(4,4,6); imagesc (z_2, t_2, r22_out_2);  caxis([0,1]); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('rho_{22}')
+title('rho_{22}')
+subplot(4,4,11); imagesc (z_2, t_2, r33_out_2);  caxis([0,1]); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('rho_{33}')
+title('rho_{33}')
+subplot(4,4,16); imagesc (z_2, t_2, r44_out_2); caxis([0,1]);  colorbar
+xlabel('z')
+ylabel('t')
+zlabel('rho_{44}')
+title('rho_{44}')
+% real parts of coherences
+subplot(4,4,2); imagesc(z_2, t_2, r12_re_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Real(rho_{12})')
+title('Real(rho_{12})')
+subplot(4,4,3); imagesc(z_2, t_2, r13_re_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Real(rho_{13})')
+title('Real(rho_{13})')
+subplot(4,4,4); imagesc(z_2, t_2, r14_re_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Real(rho_{14})')
+title('Real(rho_{14})')
+subplot(4,4,7); imagesc(z_2, t_2, r23_re_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Real(rho_{23})')
+title('Real(rho_{23})')
+subplot(4,4,8); imagesc(z_2, t_2, r24_re_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Real(rho_{24})')
+title('Real(rho_{24})')
+subplot(4,4,12); imagesc(z_2, t_2, r34_re_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Real(rho_{34})')
+title('Real(rho_{34})')
+% imaginary parts of coherences
+subplot(4,4,5); imagesc(z_2, t_2, r12_im_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Imag(rho_{12})')
+title('Imag(rho_{12})')
+subplot(4,4,9); imagesc(z_2, t_2, r13_im_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Imag(rho_{13})')
+title('Imag(rho_{13})')
+subplot(4,4,10); imagesc(z_2, t_2, r23_im_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Imag(rho_{23})')
+title('Imag(rho_{23})')
+subplot(4,4,13); imagesc(z_2, t_2, r14_im_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Imag(rho_{14})')
+title('Imag(rho_{14})')
+subplot(4,4,14); imagesc(z_2, t_2, r24_im_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Imag(rho_{24})')
+title('Imag(rho_{24})')
+subplot(4,4,15); imagesc(z_2, t_2, r34_im_out_2); colorbar
+xlabel('z')
+ylabel('t')
+zlabel('Imag(rho_{34})')
+title('Imag(rho_{34})')
+
+print('rho_map.pdf')
+